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kitano.h

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#ifndef __KITANO_H__
#define __KITANO_H__

#include <magic/mtable.h>
#include <annalee/anngenes.h>

// Externals
class ANNetwork;


//                                                                          //
//  |  / o                      -----                      | o              //
//  | /     |   ___    _        |       _    ___           |     _          //
//  |/   | -+-  ___| |/ \   __  |---  |/ \  |   \  __   ---| | |/ \   ___   //
//  | \  |  |  (   | |   | /  \ |     |   | |     /  \ (   | | |   | (   \  //
//  |  \ |   \  \__| |   | \__/ |____ |   |  \__/ \__/  ---| | |   |  ---/  //
//                                                                    __/   //

class KitanoEncoding : public ANNEncoding {
    decl_dynamic (KitanoEncoding);
  public:

                        KitanoEncoding () {FORBIDDEN}
    
                        KitanoEncoding      (const GeneticID& name,
                                             const StringMap& params);
                        KitanoEncoding      (const KitanoEncoding& orig);
    
    // Implementations

    virtual Genstruct*  replicate           () const {return new KitanoEncoding (*this);}
    virtual void        copy                (const Genstruct& other);
    virtual bool        execute             (const GeneticMsg& msg) const;
    virtual void        addPrivateGenes     (Gentainer& g, const StringMap& params);
    virtual void        check               () const;
    
  private:
    int mIters;
    int mNonTerminals;
    int mRules;

    enum strangevalues {VOIDAREA=-1, FINALZERO=-2, FINALONE=-3, UNRESOLVED=-4};

    static Gentainer*   makeGenes           ();

    PackTable<int>*     decodeMatrix        (const PackTable<int>& string,
                                             const PackTable<int>& rules,
                                             int l) const;

    ANNetwork*      makeNet             (const PackTable<int>& connmat) const;
};

#endif

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